Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788531.1_cds_XP_016467521.1_560
CDS Infomation

[gene=LOC107790102] [db_xref=GeneID:107790102] [protein=copal-8-ol diphosphate hydratase, chloroplastic] [protein_id=XP_016467521.1] [location=join(133399..133663,134674..134857,135105..135322,135893..136010,136111..136226,136582..136808,137840..137955,140115..140213,140298..140543,140744..140858,141387..141581,141866..142069)] [gbkey=CDS]
Sequence

ATGTTGAATTCGATGGAGGATGGAAGGTTAAATGTCTTAGCCTATGACACAGCTTGGGTT
TCCTTTATTCCAAATACTACTAATAATGGAAATGATCAAAGACCTATGTTTCCATCTTGT
CTTCAATGGATTATAGACAATCAACTTTCTGATGGTTCATGGGGAGAGGAGATTGTATTC
TGCATATATGATCGACTCTTGAACACACTAGTATGTGTTATTGCATTGACATTATGGAAC
ACGTGCCTTCATAAGAGAAACAAAGGTGTGATGTTTATCAAAGAAAACTTAAGCAAGCTA
GAGACAGGGGAAGTTGAAAACATGACTAGTGGATTTGAACTTGTGTTTCCTACTCTCCTT
GAAAAAGCTCAACAACTAGATATTGACATTCCGTATGATGCTCCAGTCTTAAAGGATATT
TATGCAAGGAGAGAAGTAAAGTTAACAAGAATTCCTAAAGATGTTATCCATACGATTCCG
ACAACAGTATTGTTTTCATTAGAAGGATTAAGGGACGACTTAGACTGGCAAAGACTTTTA
AAGCTTCAAATGCCTGATGGTTCATTCTTAATATCCCCTGCTTCCACTGCCTTTGCATTC
ATGGAAACAAATGATGAAAAGTGTTTGGCATATCTTCAGAACGTTGTTGAAAAGAGTAAT
GGAGGAGCGCGACAATACCCGTTCGACTTGGTAACACGACTTTGGGCAATTGATCGATTA
CAACGCCTTGGAATCTCTTATTATTTTGCGGAAGAGTTCAAGGAACTTTTGAATCATGTG
TTCAGATACTGGGACGAGGAGAATGGAATTTTTAGTGGAAGGAATTCAAACGTTTCTGAT
GTTGATGATACATGCATGGCTATAAGGTTGCTAAGGTTACATGGGTATGATGTTAGTCCA
GATGCGCTAAACAATTTCAAAGATGGTGATCAATTCGTTTGCTTCAGAGGTGAAGTGGAC
GGGTCACCAACACATATGTTTAATCTCTATAGATGTTCCCAAGTTTTATTCCCAGGAGAA
AAGATTCTTGAAGAGGCAAAGAATTTTACTTATAACTTCTTACAGCAATGTCTTGCAAAC
AACCGATGCTTAGACAAATGGGTCATAGCTAAGGACATCCCCGGGGAGATAAGGTATGCA
CTAGAATTTCCATGGTATGCCAGCTTACCTCGGGTGGAAGCTAGGTATTATATAGAACAG
TATGGCGGAGCAGATGATATTTGGATTGGCAAGACGTTATACAGAATGCCCGATGTCAAC
AACAATGTTTATTTACAAGCTGCAAAATTGGATTACAATAGATGCCAAAGTCAACATCGC
TTTGAATGGCTGATTATGCAAGAGTGGTTTGAGAAGTGCAACTTTCAACAATTTGGAATA
AGCAAAAAGTACCTCCTAGTTTCTTATTTCCTAGCTGCTGCAAGTATATTTGAAGTCGAG
AAGTCAAGAGAACGCCTTGCATGGGCTAAATCTCGTATAATATGTAAGATGATTACATCT
TACTACAATGATGAAGCCACAACTTGGACAACTAGGAATTCATTGCTAATGGAATTCAAG
GTTTCTCATGATCCGACCAGAAAAAATGGTAATGAAACAAAAGAGATCTTAGTTCTCAAA
AATCTTCGTCAGTTTTTGCGCCAACTATCAGAAGAAACTTTTGAAGACCTAGGCAAAGAC
ATCCATCACCAACTACAAAATGCTTGGGAAACGTGGTTGGTGTTCTTGAGGGAGGAAAAG
AATGCATGTCAAGAAGAAACAGAGTTGCTGGTGCGCACAATTAATCTCTCGGGCGGCTAT
ATGACACATGATGAGATATTATTCGATGCGGACTACGAGAATCTGTCCAACCTTACCAAT
AAAGTTTGTGGCAAGCGTAATGAGCTCCAAAATGACAAGGTGACGGGCGGCTCAAAGAAC
ACCAATATTGAACTCGACATGCAAGCTCTCGTAAAGTTAGTGTTTGGTAACACCTCAAGC
AACATCAACCAAGACATTAAGCAAACATTTTTTGCAGTTGTGAAGACTTTCTATTACAGT
GCGCATGTTAGTGAGGAAATAATGAACTTTCACATATCCAAAGTGCTTTTTCAGCAAGTC
TAG

Peptide Sequence

PEP ID

XP_016467521.1
PEP Infomation

PREDICTED: copal-8-ol diphosphate hydratase, chloroplastic [Nicotiana tabacum]
Sequence

MLNSMEDGRLNVLAYDTAWVSFIPNTTNNGNDQRPMFPSCLQWIIDNQLSDGSWGEEIVF
CIYDRLLNTLVCVIALTLWNTCLHKRNKGVMFIKENLSKLETGEVENMTSGFELVFPTLL
EKAQQLDIDIPYDAPVLKDIYARREVKLTRIPKDVIHTIPTTVLFSLEGLRDDLDWQRLL
KLQMPDGSFLISPASTAFAFMETNDEKCLAYLQNVVEKSNGGARQYPFDLVTRLWAIDRL
QRLGISYYFAEEFKELLNHVFRYWDEENGIFSGRNSNVSDVDDTCMAIRLLRLHGYDVSP
DALNNFKDGDQFVCFRGEVDGSPTHMFNLYRCSQVLFPGEKILEEAKNFTYNFLQQCLAN
NRCLDKWVIAKDIPGEIRYALEFPWYASLPRVEARYYIEQYGGADDIWIGKTLYRMPDVN
NNVYLQAAKLDYNRCQSQHRFEWLIMQEWFEKCNFQQFGISKKYLLVSYFLAAASIFEVE
KSRERLAWAKSRIICKMITSYYNDEATTWTTRNSLLMEFKVSHDPTRKNGNETKEILVLK
NLRQFLRQLSEETFEDLGKDIHHQLQNAWETWLVFLREEKNACQEETELLVRTINLSGGY
MTHDEILFDADYENLSNLTNKVCGKRNELQNDKVTGGSKNTNIELDMQALVKLVFGNTSS
NINQDIKQTFFAVVKTFYYSAHVSEEIMNFHISKVLFQQV

Transcript Sequence

Gene sequence data has not been registered.